Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847004.1_cds_XP_016509862.1_22759
CDS Infomation

[gene=LOC107827280] [db_xref=GeneID:107827280] [protein=glucan endo-1,3-beta-glucosidase 5-like] [protein_id=XP_016509862.1] [location=join(50583..50935,51983..53144)] [gbkey=CDS]
Sequence

ATGGAACATTTTCACTTTCATCGTAGCATCTTCTTCTTGTGGATTTTGTTCGTAATAGTC
GTCGAAAAAGTGTCAATAGCAGAGGGCATGGGCGTGAACTGGGGAACGCGGGCATCTCAT
CCGCTACCACCAGACATCGTAGTGAAGCTGTTAAAAGAGAACGGATTCAACAAAGTGAAA
TTGTTCGAAGCGGATCCAGGAGCGTTGAAGGCGCTAGGGAGATCAGGTATTCAGGTTATG
GTTGGAATACCTAATGACATGTTAGCATCATTGGCCAGCACTGTTCGTGCTGCTGAGGAA
TGGGTGCAACAGAATGTTTCCTCCTTTATTTCCAAGAATGGCGTCGATATCAGGTATGTG
GCAGTCGGAAATGAGCCTTTTCTGAAAGCCTACAAAGACACATTCATTAAAACAACATTA
CCGGCCTTAGAAAATGTGCAAGCAGCTCTTATTAAAGCAGGCCTAGGACGACAAGTCAAG
ATTACTGTTCCAATTAATGCAGATGTGTACAAAACAGACAGTGGAGTCCCCTCAGGTGGA
AATTTCAGATCAGACATTCATAATCTCATGATGAAAATTGTTAAGTTCCTAAGTGACAAT
GGGGGTCCTCTCACTATTAACATCTATCCTTTCCTTAGCCTGTACGCTGACCCTCATTTC
CCAATTGACTTCGCCTTCTTCTCTGGCTCTTCCTCTCCCGTCGTGGACGGTTCCATCACG
TATAACAATGTTTTTGAAGCTAATTATGATACCCTTGTTTGGGCTCTCGAGAAAAATGGT
TTTGGTTCGATGCCTATAATCGTAGGAGAAATCGGTTGGCCTACTGATGGTGATGCCAAC
GCGAACATTGAATATGCTAGAAAGTTCAATCAAGGTCTACTAGACCGAATTAGTCGTGGT
ATAGGCACACCTAAACGGCCTACACCACCAGACATTTACATTTTCGGGCTCGTGGATGAA
GATGCCAAGAGCATTGAACCGGGGAATTTCGAGCGCCATTGGGGTGTTTTTGCCTTTGAT
GGAGCCATTAAGTACCAACTTGATTTAGGTAACAATCGAAGTCTGACGTCGGCTAAAGGC
GTACGATATTTGGCTAGAAAATGGTGTGTAATGGCACCTGAGGCAAATGTTATGGACCCG
AGCTTGCCAGAAAGTATAAATTATGCTTGTAGCTATGCAGATTGCACTAGTCTTGGATAT
GGTTCGTCATGTGGTGGACTTGACGTTAAGAGCAATGCTTCATATGCATTTAATATGTAT
TATCAAACTATGAATCAACAGAAAGGGTCGTGTGAAAGGTTTCACAATTTGTCCGTCATT
ACAACAATTGATCCATCTCCTAGTTCTTCAGGCAGGGGCAACTCTTCTTCTTGTCGTTTT
GAGATAATGATTGATGTGGGAAGGCACCAGTCAAGGGCAAATCCAGGAACTTCTTCGGCT
ACAAAGATCAAACATTTTTCTCTTGTTTTCTTTGTGCTAGCATTCGTAGTGGACTACTAC
ATGTCTCTGCCTTAG

Peptide Sequence

PEP ID

XP_016509862.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase 5-like [Nicotiana tabacum]
Sequence

MEHFHFHRSIFFLWILFVIVVEKVSIAEGMGVNWGTRASHPLPPDIVVKLLKENGFNKVK
LFEADPGALKALGRSGIQVMVGIPNDMLASLASTVRAAEEWVQQNVSSFISKNGVDIRYV
AVGNEPFLKAYKDTFIKTTLPALENVQAALIKAGLGRQVKITVPINADVYKTDSGVPSGG
NFRSDIHNLMMKIVKFLSDNGGPLTINIYPFLSLYADPHFPIDFAFFSGSSSPVVDGSIT
YNNVFEANYDTLVWALEKNGFGSMPIIVGEIGWPTDGDANANIEYARKFNQGLLDRISRG
IGTPKRPTPPDIYIFGLVDEDAKSIEPGNFERHWGVFAFDGAIKYQLDLGNNRSLTSAKG
VRYLARKWCVMAPEANVMDPSLPESINYACSYADCTSLGYGSSCGGLDVKSNASYAFNMY
YQTMNQQKGSCERFHNLSVITTIDPSPSSSGRGNSSSCRFEIMIDVGRHQSRANPGTSSA
TKIKHFSLVFFVLAFVVDYYMSLP

Transcript Sequence

Gene sequence data has not been registered.